Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852976.1_cds_XP_016512055.1_24733
CDS Infomation

[gene=LOC107829126] [db_xref=GeneID:107829126] [protein=uncharacterized protein LOC107829126 isoform X3] [protein_id=XP_016512055.1] [location=join(12174..12363,12998..13220,16694..16841,18479..18586,20000..20163,20873..21038,21283..21419,24388..25075,25786..25898,26294..26363)] [gbkey=CDS]
Sequence

ATGCACAGCAAATTACTTGCAGGAGTAGAACTACTTAGCCCATCACCAGCTTTTTATGCT
CTCCCTTACCACCATAATCATCCATTTTCGCCCAAGATTCTGTGCTGCACCAACAATTCT
TCTTCGGACCATAAGTTCAAGTTCAATTTTGTGGGTGATAGGAAGTGGAAGTTCAATGAT
ATTGGTACCAGTAGAGTGCAAGAATCTGTAAATCACTGGCTGTCAAAGACACAAAACTTT
TTCAATGAAGTTACTTCACCGCTGGTAAAAACTGTAAATGATAAAAGAATCAGTGTGAAT
AATGATACTCAAGATATGGAGGACACATTCATGGCTGAGCAGACTGTTGATAGCCAAACA
CCGAATGGTGATCTTTCTGTTGCTGCTATTCTTTCCATTGAGCAATTTAGCAGGATGAAC
GGATTGACTGGGAAGAAAATGCAGAAGATATTCAAAGCAATTGGTCCTGAATCTGTTCAT
AGTGATGCTCGCAGTTTGGTTGAATACTGCTGCTTTAGGTTTCTGTCAAAGGATTCTTCT
CTTCTTCATCCTTGCCTGAAGGAACCTGCATTCCAGAGACTGATTTTCGTAACTATGCTT
GCCTGGGAGCGACCATATAGGAGCAGAGGAGACTCCCAAGCTAAAGTTTCAGAGAAGCAC
TCTCTCCAGCTAAAGAGAAGACTAGTTGGAGAAGAGGCTTTTGTTCGTATTGCTCCTGCT
GTTGCTGGTATAGCTGATTGGACAACAGCACACAACCTTTTCAAAGCTCTTGCTGGTAAC
GATCAGGGCATCTCATTTACCTCATGGTCCACATATATCGGTGAACTTCTCAAAGTGCAT
GAAGGAAGGAAGTCATACCAGTTTAAAGATTCCGCCCAGCTCCACAATGAGAGAATCTTG
TGCATTGCTTCTGGCGGAAAACACCCTGTTCTTAAATGGGAGAATAATATGGCATGGCCT
GGAAAACTAATTTTGACTGATAGAGCCCTTTACTTTGAGGCAGTTGGTTTGATGGGAAAA
AGAAATGCATCAAGATTGGATCTTACAGTAGAAGGTTCACTCGTAAAGAGAACAAGAGTT
GGGCCTCTGGGATTTGACCTTCTAGATTCTGCTGTATCTGTCACTTCAGGTCCTCAGTTG
GACACATGGGTATTAGAATTTGTGGACTGGGGAGGAGAAATGAGACGGGATGTTTGGTAT
GCATGCATCAGCGAAGTAATTGCTTTATACAAGTTCATACGAGAATTTGGACCGGAGGAA
GGTGATCAATCAGTGTACAATGTCTATGGTGCCCAGAAAGGGAAGGCAAGAGCAATTTCT
TATGCTACCAATGCTGTTAGGAGACTTCAGGCTCTTCAATATGCTCAAAAGCTCTTGGAG
GAGCCAACTAAATTGGTTCAGTTCTCATATTTGCAAAATGCACCTTATGGTGACATTGTA
TTACAAACTCTAGCAGTTAATTGTTGGGCTGGACCATTGGTTACAAAAGTGACTGATCAA
GAGTATCAATCACGGGGATCACCTAAATCCACAAACGAGGCAACAGAAAGTAGTAGCCAT
GTGTTTGACATAGATGGAAGTGTGTACTTGCGAAAGTGGATGAAGTCTCCATCATGGGAT
TCTAGTGCTTCACTTGCTTTTTGGAAGAACTCCCTATCGAAACGGGGGATAGTTTTCAGT
AAAAATCTTGTTGTCGCTGATATGAATTTGATTGAAAAGGCAGCAGTGACCTGTAGAGAT
AAATATCAAGTAGCAGAGAAAACACAAGCCACAATTGATGCCGCTATGATTGAAGGGATA
CCTAGTAACATTGACCTTTTTAAGGAACTTGTGTTTCCTTTAACAGTTTTGGTAAACAAC
TTTGAGAAACTTAGGCGTTGGGAGGATCCCCTATTGACTGCCTCTTCTCTTGCACTTGCA
TATACGCTTATATTCAGGTTGTGGATATTCATGGGAAGTGCTACACTCTGTTGTACTCTC
AAATTTTTGCCAGTACATGTGCAGTGA

Peptide Sequence

PEP ID

XP_016512055.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107829126 isoform X3 [Nicotiana tabacum]
Sequence

MHSKLLAGVELLSPSPAFYALPYHHNHPFSPKILCCTNNSSSDHKFKFNFVGDRKWKFND
IGTSRVQESVNHWLSKTQNFFNEVTSPLVKTVNDKRISVNNDTQDMEDTFMAEQTVDSQT
PNGDLSVAAILSIEQFSRMNGLTGKKMQKIFKAIGPESVHSDARSLVEYCCFRFLSKDSS
LLHPCLKEPAFQRLIFVTMLAWERPYRSRGDSQAKVSEKHSLQLKRRLVGEEAFVRIAPA
VAGIADWTTAHNLFKALAGNDQGISFTSWSTYIGELLKVHEGRKSYQFKDSAQLHNERIL
CIASGGKHPVLKWENNMAWPGKLILTDRALYFEAVGLMGKRNASRLDLTVEGSLVKRTRV
GPLGFDLLDSAVSVTSGPQLDTWVLEFVDWGGEMRRDVWYACISEVIALYKFIREFGPEE
GDQSVYNVYGAQKGKARAISYATNAVRRLQALQYAQKLLEEPTKLVQFSYLQNAPYGDIV
LQTLAVNCWAGPLVTKVTDQEYQSRGSPKSTNEATESSSHVFDIDGSVYLRKWMKSPSWD
SSASLAFWKNSLSKRGIVFSKNLVVADMNLIEKAAVTCRDKYQVAEKTQATIDAAMIEGI
PSNIDLFKELVFPLTVLVNNFEKLRRWEDPLLTASSLALAYTLIFRLWIFMGSATLCCTL
KFLPVHVQ

Transcript Sequence

Gene sequence data has not been registered.